Information for 12-ACAGTGATCATG (Motif 4)


Reverse Opposite:

p-value:1e-12
log p-value:-2.859e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets172.0 +/- 127.0bp
Average Position of motif in Background349.7 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGATCATG--
CGAACAGTGCTCACTAT

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACAGTGATCATG----
-TAGTGATCATCATTA

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------ACAGTGATCATG
NNNNTGCCAGTGATTG--

MA0512.1_Rxra/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACAGTGATCATG
-CAAAGGTCAGA

MA0592.1_ESRRA/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACAGTGATCATG-
--NGTGACCTTGG

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ACAGTGATCATG
------GTCATN

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACAGTGATCATG---
GGCGAGGGGTCAAGGGC

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACAGTGATCATG---
ACCGGTTGATCACCTGA

MA0078.1_Sox17/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGATCATG
GACAATGNN----

MA0160.1_NR4A2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ACAGTGATCATG
---GTGACCTT-