Information for 3-AATCATCG (Motif 5)


Reverse Opposite:

p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.729
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif82.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets277.8 +/- 129.3bp
Average Position of motif in Background221.5 +/- 132.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------AATCATCG--
AAGGCGAAATCATCGCA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AATCATCG
-GTCATN-

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AATCATCG---
TAGTGATCATCATTA

MA0038.1_Gfi1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATCATCG
CAAATCACTG

MA0117.1_Mafb/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATCATCG
NCGTCAGC-

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AATCATCG---
CGACCCAATCAACGGTG

PH0022.1_Dlx3/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AATCATCG---
NNNGGTAATTATNGNGN

MA0490.1_JUNB/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATCATCG
ATGAGTCATCN

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATCATCG--------
AAAACATCGTTTTTAAG

PH0023.1_Dlx4/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AATCATCG---
GTCGGTAATTATNGNGN