Information for 1-GATTCGATTCGA (Motif 1)


Reverse Opposite:

p-value:1e-39
log p-value:-9.130e+01
Information Content per bp:1.658
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets194.4 +/- 122.5bp
Average Position of motif in Background213.7 +/- 202.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)5.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GATTCGATTCGA
TGATTAAATTA--

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATTCGATTCGA
GCATTCCAGN---

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GATTCGATTCGA----
----SSAATCCACANN

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GATTCGATTCGA
TAATCAATTA--

PB0169.1_Sox15_2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GATTCGATTCGA
TNGAATTTCATTNAN

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GATTCGATTCGA--
---TCCAATCCACA

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GATTCGATTCGA
CAGTTTCGNTTCTN

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GATTCGATTCGA
TNTGGTTTCGATACN-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GATTCGATTCGA
RCATTCCWGG---

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GATTCGATTCGA----
TAAGCCACTTGAAATT