Information for 16-GTTTCAAAACTG (Motif 10)


Reverse Opposite:

p-value:1e-12
log p-value:-2.984e+01
Information Content per bp:1.950
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets188.4 +/- 115.1bp
Average Position of motif in Background187.8 +/- 127.4bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GTTTCAAAACTG
CGGTTTCAAA----

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCAAAACTG
TNTGGTTTCGATACN-

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCAAAACTG
TGGTTTCAGT----

MA0102.3_CEBPA/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTTCAAAACTG
ATTGCACAATA-

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTTTCAAAACTG-
CAATTGCAAAAATAT

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTTTCAAAACTG---
-----NHAACBGYYV

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCAAAACTG---
NNTTTTCACACCTTNNN

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GTTTCAAAACTG
AATAGGGTATCAATATT-

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCAAAACTG
CAGTTTCGNTTCTN

MA0466.1_CEBPB/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTTTCAAAACTG
TATTGCACAAT--