Information for 3-TCCTCACW (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.798
Number of Target Sequences with motif326.0
Percentage of Target Sequences with motif17.99%
Number of Background Sequences with motif6272.1
Percentage of Background Sequences with motif13.10%
Average Position of motif in Targets203.6 +/- 112.8bp
Average Position of motif in Background202.8 +/- 116.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCACW-
KTTCACACCT

POL002.1_INR/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCCTCACW---
---TCAGTCTT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCCTCACW-
ATTAACACCT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCCTCACW
CNGTCCTCCC-

MA0067.1_Pax2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCCTCACW-
-AGTCACGC

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCCTCACW
HTTTCCCASG

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCACW--
NNACTTACCTN

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.61
Offset:-10
Orientation:forward strand
Alignment:----------TCCTCACW--
CCTTTACCCTTCTTCACCTT

MA0595.1_SREBF1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCTCACW----
--ATCACCCCAC

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCACW-------
NNTTTTCACACCTTNNN