Information for 21-ACACACACACWC (Motif 14)


Reverse Opposite:

p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.535
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif5.63%
Number of Background Sequences with motif1458.2
Percentage of Background Sequences with motif3.04%
Average Position of motif in Targets186.5 +/- 107.9bp
Average Position of motif in Background199.6 +/- 106.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACACACACACWC--
AGCGGCACACACGCAA

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACACACACACWC-
AAAGTAAACAAAAATT

PB0017.1_Foxj3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACACACACACWC
AAAAAGTAAACAAACAC

MA0481.1_FOXP1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACACACACACWC
CAAAAGTAAACAAAG--

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACACACACACWC
AAATAAACA-----

MA0593.1_FOXP2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACACACACACWC
AAGTAAACAAA---

MA0042.1_FOXI1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACACACACACWC
AAACAAACANNC--

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------ACACACACACWC
NNNVCTGWGYAAACASN---

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACACACACACWC
CGAAGCACACAAAATA

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACACACACACWC
NDGTAAACARRN--