Information for 19-TTTTGCCCCC (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.612e+01
Information Content per bp:1.653
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif7.51%
Number of Background Sequences with motif2246.4
Percentage of Background Sequences with motif4.69%
Average Position of motif in Targets198.0 +/- 122.0bp
Average Position of motif in Background202.5 +/- 116.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGCCCCC-----
NNANTTGACCCCTNNNN

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTGCCCCC------
AAATTCCCCCCGGAAGT

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTGCCCCC------
AGGAGACCCCCAATTTG

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGCCCCC-----
NNNNTTGACCCCTNNNN

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTTGCCCCC-----
TGTCGTGACCCCTTAAT

MA0155.1_INSM1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTTTGCCCCC-----
---CGCCCCCTGACA

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTTTGCCCCC-------
--AAGCCCCCCAAAAAT

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTTGCCCCC------
TATCGACCCCCCACAG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTTGCCCCC-
VDTTTCCCGCCA

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTTGCCCCC--
TTTTCGCGCGAA