Information for 5-AAACCGCW (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.854
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif5.57%
Number of Background Sequences with motif1574.5
Percentage of Background Sequences with motif3.29%
Average Position of motif in Targets196.6 +/- 117.3bp
Average Position of motif in Background199.7 +/- 114.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAACCGCW-
NHAACBGYYV

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAACCGCW--
AAACCACANN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAACCGCW-
NAAACCACAG

MA0002.2_RUNX1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAACCGCW---
AAACCACAGAN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAACCGCW-
-AACCGANA

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAACCGCW--
AAACCACAGC

MA0511.1_RUNX2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAACCGCW------
CAAACCACAAACCCC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAACCGCW
ACTGAAACCA--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAACCGCW---
NWAACCACADNN

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAACCGCW-----
TTGAAAACCGTTAATTT