Information for 2-CCATTCGATG (Motif 2)


Reverse Opposite:

p-value:1e-30
log p-value:-7.088e+01
Information Content per bp:1.877
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets206.7 +/- 128.8bp
Average Position of motif in Background158.2 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCATTCGATG----
AATCCCTTTGATCTATC

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCATTCGATG----
ATTTCCTTTGATCTATA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCATTCGATG-
TNCCTTTGATGT

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCATTCGATG----
NNTTCCTTTGATCTANA

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCATTCGATG-
-CCTTTGAWGT

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCATTCGATG----
NNTTCCTTTGATCTNNA

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATTCGATG-----
CCATTGTATGCAAAT

MA0151.1_ARID3A/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCATTCGATG
---TTTAAT-

MA0523.1_TCF7L2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCATTCGATG---
TNCCTTTGATCTTN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCATTCGATG-
-CCTTTGATGT