Information for 21-DTRTAYATRT (Motif 22)


Reverse Opposite:

p-value:1e-3
log p-value:-7.126e+00
Information Content per bp:1.482
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif711.0
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets175.6 +/- 117.6bp
Average Position of motif in Background200.6 +/- 114.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-DTRTAYATRT------
TAAATACATGTAAAATT

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-DTRTAYATRT---
TGTATATATATACC

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-DTRTAYATRT------
AATATACATGTAATATA

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-DTRTAYATRT------
AAAATACATGTAATACT

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-DTRTAYATRT------
AAAATACATGTAAAAAT

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-DTRTAYATRT------
AATATACATGTAAAATT

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--DTRTAYATRT-----
NNTTTTACATGTANNNT

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---DTRTAYATRT---
NANTTATATATAANGN

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--DTRTAYATRT-----
ANNNGGATATATCCNNN

MA0033.1_FOXL1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:DTRTAYATRT-
---TATGTNTA