Information for 6-GATGATTCCA (Motif 3)


Reverse Opposite:

p-value:1e-18
log p-value:-4.267e+01
Information Content per bp:1.978
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif53.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets224.0 +/- 130.0bp
Average Position of motif in Background195.4 +/- 110.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GATGATTCCA----
TNNNATGATTTCNNCNN

MA0488.1_JUN/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GATGATTCCA-
AAGATGATGTCAT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GATGATTCCA--
--GCATTCCAGN

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GATGATTCCA--
AAAGATGATGTCATC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GATGATTCCA--
--RCATTCCWGG

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATGATTCCA-
NGATGACGTCAT

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GATGATTCCA-----
TTCTAGAANNTTCCAGAANN

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATGATTCCA
CAGCTGTTTCCT

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GATGATTCCA----
ANNNATGATACCCCATC

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GATGATTCCA-
-MTGATGCAAT