Information for 11-TTCGTTGBAAAC (Motif 5)


Reverse Opposite:

p-value:1e-17
log p-value:-4.101e+01
Information Content per bp:1.824
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets194.1 +/- 99.8bp
Average Position of motif in Background166.0 +/- 94.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0520.1_Stat6/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTCGTTGBAAAC-
ANTTCTCAGGAANNN

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTCGTTGBAAAC-
-----TGTAAACA

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCGTTGBAAAC
TTCTNMGGAA--

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCGTTGBAAAC
TTCTNNAGAANT

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTCGTTGBAAAC----
----NDGTAAACARRN

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTCGTTGBAAAC---
AGGACGCTGTAAAGGGA

MA0480.1_Foxo1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTCGTTGBAAAC----
-----TGTAAACAGGA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTCGTTGBAAAC-
---AATGGAAAAT

MA0593.1_FOXP2/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTCGTTGBAAAC---
----AAGTAAACAAA

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTCGTTGBAAAC
-----TGGAAAA