Information for 12-ATCTGCAAGKGG (Motif 6)


Reverse Opposite:

p-value:1e-17
log p-value:-4.056e+01
Information Content per bp:1.810
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif52.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets187.3 +/- 112.6bp
Average Position of motif in Background202.7 +/- 133.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCTGCAAGKGG
ATATGCAAAT--

MA0507.1_POU2F2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATCTGCAAGKGG
TTCATTTGCATAT--

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCTGCAAGKGG----
NANTTTCAAGTGGTTAN

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATCTGCAAGKGG
TTATGCAAAT--

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATCTGCAAGKGG
ANATTTTTGCAANTN-

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCTGCAAGKGG----
AANTTCAAGTGGCTTN

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCTGCAAGKGG----
AAATTCAAGTGGNTTN

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATCTGCAAGKGG
TNTAATTTGCATANNN

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ATCTGCAAGKGG
GAAAAAATTGCAAGG--

MA0155.1_INSM1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATCTGCAAGKGG---
---TGTCAGGGGGCG