Information for 13-GTTCAACTCTGT (Motif 7)


Reverse Opposite:

p-value:1e-17
log p-value:-3.917e+01
Information Content per bp:1.901
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif33.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets228.7 +/- 100.4bp
Average Position of motif in Background220.9 +/- 121.3bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0512.1_Rxra/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTTCAACTCTGT
NCTGACCTTTG-

MA0133.1_BRCA1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTTCAACTCTGT
--ACAACAC---

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GTTCAACTCTGT
CTCCAGGGGTCAATTGA--

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTTCAACTCTGT
GTTTCACTTCCG-

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GTTCAACTCTGT-
NNAGTCCCACTCNNNN

MA0442.1_SOX10/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GTTCAACTCTGT
------CTTTGT

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:GTTCAACTCTGT-
-------GCTGTG

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GTTCAACTCTGT-----
NNTGTTCTTTTTTGTTTACT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GTTCAACTCTGT
AGGTCA-------

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GTTCAACTCTGT
AGNGTTCTAATGANN