Information for 14-TTCTCAGAAACT (Motif 8)


Reverse Opposite:

p-value:1e-16
log p-value:-3.703e+01
Information Content per bp:1.941
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif37.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets206.7 +/- 122.9bp
Average Position of motif in Background200.6 +/- 117.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TTCTCAGAAACT
NTTTCTNAGAAA--

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTCTCAGAAACT
ATTTCCAAGAA---

MA0520.1_Stat6/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTCTCAGAAACT-
ANTTCTCAGGAANNN

MA0144.2_STAT3/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGAAACT
TTTCCCAGAAN--

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTCTCAGAAACT
NNNTTTCCTGGAAA--

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCTCAGAAACT
TTCTNMGGAA--

MA0137.3_STAT1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGAAACT
TTTCCTGGAAA--

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTCTCAGAAACT
NATTTCCNGGAAAT-

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGAAACT
TTTCCNGGAAAN-

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTCTCAGAAACT
TTCTNNAGAANT