Information for 15-GCGGCTTTTTGC (Motif 9)


Reverse Opposite:

p-value:1e-14
log p-value:-3.239e+01
Information Content per bp:1.871
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets172.3 +/- 118.0bp
Average Position of motif in Background226.9 +/- 101.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGGCTTTTTGC-----
--ANATTTTTGCAANTN

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
---YCTTTGTTCC

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCGGCTTTTTGC
----CTGTTTAC

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
------TTTTCCA

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCGGCTTTTTGC-----
---TTTTTTTTCNNGTN

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
---CCWTTGTYYB

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCGGCTTTTTGC--------
---NSTGTTTRCWCAGBNNN

MA0442.1_SOX10/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCGGCTTTTTGC
----CTTTGT--

MA0480.1_Foxo1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
--TCCTGTTTACA

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCTTTTTGC
GGNGCGNCTGTTNNN