Information for 1-KAAAAAAAAAAA (Motif 1)


Reverse Opposite:

p-value:1e-32
log p-value:-7.593e+01
Information Content per bp:1.560
Number of Target Sequences with motif921.0
Percentage of Target Sequences with motif20.15%
Number of Background Sequences with motif6200.7
Percentage of Background Sequences with motif13.67%
Average Position of motif in Targets197.5 +/- 95.3bp
Average Position of motif in Background194.5 +/- 109.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-KAAAAAAAAAAA----
GTTAAAAAAAAAAATTA

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--KAAAAAAAAAAA---
GTTCAAAAAAAAAATTC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--KAAAAAAAAAAA
TACTGGAAAAAAAA

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---KAAAAAAAAAAA
AGCCGAAAAAAAAAT

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:KAAAAAAAAAAA---
AACAAACAACAAGAG

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:KAAAAAAAAAAA---
---AAACAAACATTC

MA0042.1_FOXI1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:KAAAAAAAAAAA---
---AAACAAACANNC

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-KAAAAAAAAAAA-
AAATAAGAAAAAAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--KAAAAAAAAAAA--
ATATCAAAACAAAACA

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KAAAAAAAAAAA
---AAATAAACA