Information for 7-GTGTGTGTGTGT (Motif 10)


Reverse Opposite:

p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.940
Number of Target Sequences with motif163.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif952.7
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets200.7 +/- 104.8bp
Average Position of motif in Background190.1 +/- 122.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0472.1_EGR2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTGTGTGTGTGT---
GTGCGTGGGCGGGNG

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTGTGTGTGTGT----
NNGCGTGTGTGCNGCN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTGTGTGTGTGT
-TGCGTGGGYG-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTGTGTGT
NGCGTGGGCGGR-

MA0042.1_FOXI1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGTGTGTGTGT
GGATGTTTGTTT

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGTGTGTGTGT--
--NTGGGTGTGGCC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTGTGTGTGTGT-
---TGGGTGTGGC

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGTGTGT
NNNNTTGTGTGCTTNN

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTGTGTGTGTGT--
---TGGGTGTGGCN

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTGTGTGTGTGT----
-GGNGCGNCTGTTNNN