Information for 2-CATGTACT (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.807
Number of Target Sequences with motif336.0
Percentage of Target Sequences with motif7.35%
Number of Background Sequences with motif2413.7
Percentage of Background Sequences with motif5.32%
Average Position of motif in Targets199.6 +/- 111.4bp
Average Position of motif in Background193.1 +/- 111.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------CATGTACT---
AATATACATGTAATATA

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------CATGTACT---
AAAATACATGTAATACT

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.73
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTACT--
ANTNTTACATGTATNTA

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CATGTACT-----
TTATGTACTAATAA

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTACT--
ANTTNTACATGTANTTN

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------CATGTACT---
AATATACATGTAAAATT

MA0058.2_MAX/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CATGTACT-
CCATGTGCTT

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTACT--
NNTTTTACATGTANNNT

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CATGTACT-----
ACTCCAAGTACTTGGAA

MA0147.2_Myc/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATGTACT-
CCATGTGCTT