Information for 4-AGGGTAAG (Motif 13)


Reverse Opposite:

p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.775
Number of Target Sequences with motif912.0
Percentage of Target Sequences with motif19.96%
Number of Background Sequences with motif7619.7
Percentage of Background Sequences with motif16.80%
Average Position of motif in Targets187.7 +/- 108.4bp
Average Position of motif in Background191.3 +/- 110.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGGGTAAG---
CAGGTAAGTAT

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTAAG-
GAAAGTGAAAGT

MA0111.1_Spz1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGGGTAAG---
AGGGTAACAGC

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTAAG-------
TTNGGGTACGCCNNANN

MA0508.1_PRDM1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGGGTAAG---
AGAAAGTGAAAGTGA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGGTAAG--
AGAGGAAGTG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGGTAAG---
TTAAGAGGAAGTTA

MA0080.3_Spi1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGGGTAAG---
AAAAAGAGGAAGTGA

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGGTAAG---
AAGGCAAGTGT

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTAAG
TNNGGGCAG-