Information for 11-GGGAGTGGGAAG (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.725e+01
Information Content per bp:1.815
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif47.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets178.3 +/- 107.2bp
Average Position of motif in Background171.9 +/- 109.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGAGTGGGAAG----
NNNNGGGGGAAGANGG

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGTGGGAAG
GGGGNGGGGC---

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGAGTGGGAAG-
---CSTGGGAAAD

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGGAGTGGGAAG--
TGCGGAGTGGGACTGG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGAGTGGGAAG
GGGGGGGG----

MA0057.1_MZF1_5-13/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGGAGTGGGAAG
-GGAGGGGGAA-

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGAGTGGGAAG
TGGGTGGGGC---

MA0471.1_E2F6/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGAGTGGGAAG-
--GGGCGGGAAGG

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGTGGGAAG
NNGTGNGGGCGGGAG-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGGAGTGGGAAG-
---GGCGGGAARN