Information for 12-TTCTTATGGCTG (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets161.3 +/- 106.1bp
Average Position of motif in Background262.8 +/- 93.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCTTATGGCTG-
NGANTTTTATGGCTCN

MA0465.1_CDX2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTCTTATGGCTG
-TTTTATGGCTN

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTATGGCTG-
ANTAATTTTATGGCCGN

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCTTATGGCTG
NTTTTATGAC--

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTCTTATGGCTG----
NNTNANTTCTTATCTCTANANN

MA0036.2_GATA2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCTTATGGCTG
AGATTCTTATCTGT-

MA0035.3_Gata1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCTTATGGCTG
TTCTTATCTGT-

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTATGGCTG
AGNGTTCTAATGANN-

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTATGGCTG--
NAATTTTATTACCNNN

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCTTATGGCTG
-GTTAATGGCC-