Information for 2-ATCGAATGGAAT (Motif 2)


Reverse Opposite:

p-value:1e-16
log p-value:-3.816e+01
Information Content per bp:1.594
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets209.1 +/- 109.9bp
Average Position of motif in Background242.1 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)4.70
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ATCGAATGGAAT--
----NCTGGAATGC

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATCGAATGGAAT----
-TTGAATGAAATTCGA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATCGAATGGAAT--
----AATGGAAAAT

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATCGAATGGAAT-
TATTATGGGATGGATAA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATCGAATGGAAT--
----CCWGGAATGY

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATCGAATGGAAT
NNNTATTGAATTGNNN

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATCGAATGGAAT---
---AGATGCAATCCC

MA0152.1_NFATC2/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATCGAATGGAAT-
------TGGAAAA

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATCGAATGGAAT--
----CCWGGAATGY

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATCGAATGGAAT--
--YTAATYNRATTA