Information for 15-GCCTGGAACA (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.303e+01
Information Content per bp:1.842
Number of Target Sequences with motif140.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif920.0
Percentage of Background Sequences with motif2.03%
Average Position of motif in Targets194.2 +/- 106.1bp
Average Position of motif in Background192.0 +/- 108.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCCTGGAACA-
-CCAGGAACAG

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCCTGGAACA
---TGGAAAA

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGAACA
CTTCCNGGAA--

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGAACA
GGTCTGGCAT-

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGAACA
AGGCCTAG----

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGAACA---
TGCCCTGGGGCNANN

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGAACA---
TTTCCTGGAAAGNNN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGGAACA----
NNGATCTAGAACCTNNN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGAACA
AGGCCTNG----

MA0505.1_Nr5a2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCTGGAACA-
GCTGACCTTGAACTN