Information for 7-CGCCCCGG (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.234e+01
Information Content per bp:1.607
Number of Target Sequences with motif198.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif1414.0
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets194.1 +/- 106.5bp
Average Position of motif in Background192.5 +/- 104.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCGG---
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CGCCCCGG---
TCACCCCGCCCCAAATT

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCGG----
AAATTCCCCCCGGAAGT

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCCCGG
-GCTCCG-

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCCGG-----
NCCCCCCCGGGGGGN

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCGG
GGCCCCGCCCCC-

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCCGG--
AAGCATACGCCCAACTT

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCCGG-----
ACCCCCCCGGGGGGN

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCCGG----
CCCCCCCGGGGGNN

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCCCCGG----
TCCGCCCCCGCATT