Information for 8-TGGGAGCG (Motif 26)


Reverse Opposite:

p-value:1e-5
log p-value:-1.165e+01
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif183.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets189.6 +/- 121.4bp
Average Position of motif in Background184.4 +/- 100.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TGGGAGCG
-CGGAGC-

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGGGAGCG-----
NNNAAGGGGGCGGGNNN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAGCG
CSTGGGAAAD

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGGGAGCG---
-GGGAGGACNG

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGGAGCG--
GGGGNGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGGAGCG--
DGGGYGKGGC

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGGGAGCG
---CAGCC

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGGAGCG---
TGGGTGTGGCN

MA0039.2_Klf4/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGGAGCG--
TGGGTGGGGC

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGGGAGCG-----
GTATTGGGTGGGTAATT