Information for 23-TGAAGGTGAGTG (Motif 31)


Reverse Opposite:

p-value:1e-3
log p-value:-8.206e+00
Information Content per bp:1.584
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets189.0 +/- 101.4bp
Average Position of motif in Background245.1 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TGAAGGTGAGTG-
--CAGGTAAGTAT

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGAAGGTGAGTG
TCAAGGTCAN--

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGAAGGTGAGTG
--CAGGTGAGG-

MA0141.2_Esrrb/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGAAGGTGAGTG
AGCTCAAGGTCA---

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGAAGGTGAGTG---
----CTTGAGTGGCT

MA0071.1_RORA_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAAGGTGAGTG
ATCAAGGTCA---

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAAGGTGAGTG
BTCAAGGTCA---

MA0122.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGAAGGTGAGTG--
-----TTAAGTGGA

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGGTGAGTG
ANGNAAAGGTCA---

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAAGGTGAGTG
NNCAGGTGNN--