Information for 5-CACATTATGC (Motif 5)


Reverse Opposite:

p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.838
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif569.7
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets190.1 +/- 113.6bp
Average Position of motif in Background193.2 +/- 113.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CACATTATGC--
GCAACCTCATTATNNNN

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CACATTATGC---
TGTTCCCATTGTGTACT

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CACATTATGC--
NNNACCTCATTATCNTN

MA0078.1_Sox17/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACATTATGC
CTCATTGTC-

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACATTATGC-------
TNNATTATGCATANNTT

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACATTATGC--
GAGCACAGCAGGACA

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACATTATGC
ACCACATCCTGT

MA0466.1_CEBPB/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CACATTATGC----
---ATTGTGCAATA

MA0088.1_znf143/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CACATTATGC-----
GATTTCCCATAATGCCTTGC

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CACATTATGC-
ATTTCCCAGVAKSCY