Information for 7-TGATTAGATG (Motif 8)


Reverse Opposite:

p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.972
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets205.5 +/- 98.4bp
Average Position of motif in Background209.5 +/- 100.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGATTAGATG-
TGATTAAATTA

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGATTAGATG
RGGATTAR---

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGATTAGATG
YTAATTAVHT-

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TGATTAGATG-
NNNNGTTGATTGGGTCG

PH0014.1_Cphx/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGATTAGATG--
NTTGATTNNATCAN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGATTAGATG
NBWGATAAGR--

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGATTAGATG--
TAAACTGATAAGAAGAT

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGATTAGATG
GGATTAGC--

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TGATTAGATG
TTGCCCGGATTAGG--

PH0131.1_Pax4/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TGATTAGATG-
NNGNGCTAATTAGNTNA