Information for 1-TCYGTSAGTTGA (Motif 1)


Reverse Opposite:

p-value:1e-39
log p-value:-9.006e+01
Information Content per bp:1.930
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets250.8 +/- 141.6bp
Average Position of motif in Background220.6 +/- 168.8bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCYGTSAGTTGA
--TGGCAGTTGN

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCYGTSAGTTGA---
NNNTGGCAGTTGGTNN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCYGTSAGTTGA
--TGGCAGTTGG

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCYGTSAGTTGA---
CACGGCAGTTGGTNN

MA0595.1_SREBF1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCYGTSAGTTGA-
---GTGGGGTGAT

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCYGTSAGTTGA---
---GWAAYHTGABMC

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCYGTSAGTTGA
---GGCVGTTR-

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCYGTSAGTTGA
-----GTGTTGN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCYGTSAGTTGA
--TGTCGGTT--

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCYGTSAGTTGA
--BRRCVGTTDN