Information for 3-GASTCGAA (Motif 17)


Reverse Opposite:

p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.850
Number of Target Sequences with motif164.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif1395.1
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets246.5 +/- 132.0bp
Average Position of motif in Background245.9 +/- 143.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0037.1_Isgf3g_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GASTCGAA-----
CAAAATCGAAACTAA

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GASTCGAA------
CGTATCGAAACCAAA

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GASTCGAA----
GAGAACCGAAACTG

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GASTCGAA--
NTNNNAGGAGTCTCNTN

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GASTCGAA-----
ATAAACCGAAACCAA

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GASTCGAA---
AGAAACGAAAGT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GASTCGAA--
CGGAAGTGAAAC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GASTCGAA---
-AATGGAAAAT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GASTCGAA---
GGCAAAAGTCCAATAA

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GASTCGAA
ATGASTCATH