Information for 2-TGAGAATGCTTC (Motif 2)


Reverse Opposite:

p-value:1e-34
log p-value:-7.920e+01
Information Content per bp:1.949
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets261.6 +/- 136.1bp
Average Position of motif in Background181.3 +/- 138.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TGAGAATGCTTC-
-------GCTTCC

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGAATGCTTC
GNNACCGAGAATNNN--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAATGCTTC
CSTGGGAAAD----

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGAGAATGCTTC--
GGAGAAAGGTGCGA

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGAGAATGCTTC
TTGACCGAGAATTCC--

MA0164.1_Nr2e3/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGAGAATGCTTC
----CAAGCTT-

MA0078.1_Sox17/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGAGAATGCTTC
-GACAATGNN--

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGAGAATGCTTC
TATCATTAGAACGCT--

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGAGAATGCTTC
AGGTGTTAAT-----

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGAGAATGCTTC
CCWGGAATGY---