Information for 12-GGACTGAG (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.530
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif656.0
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets260.9 +/- 157.7bp
Average Position of motif in Background259.3 +/- 150.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGACTGAG
NNNANTGA-

MA0090.1_TEAD1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGACTGAG
CNGAGGAATGTG

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGACTGAG---
ATGACTCAGCAD

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGACTGAG
NCTGGAATGC-

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGACTGAG---
NNATTGGACTTTNGNN

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGACTGAG
ATGGGGTGAT

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGACTGAG--
GATGACTCAGCA

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGACTGAG---
AGGATGACTCAGCAC

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGACTGAG--
TGACTCAGCA

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGACTGAG--
GTGGCGTGACNG