Information for 13-TCTCAGAA (Motif 22)


Reverse Opposite:

p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.918
Number of Target Sequences with motif182.0
Percentage of Target Sequences with motif5.31%
Number of Background Sequences with motif1768.9
Percentage of Background Sequences with motif3.78%
Average Position of motif in Targets250.2 +/- 136.4bp
Average Position of motif in Background249.3 +/- 148.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--TCTCAGAA--
TTTCTNAGAAAN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TCTCAGAA--
TTCTTGGAAAN

MA0144.2_STAT3/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCTCAGAA-
TTTCCCAGAAN

MA0518.1_Stat4/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCAGAA-
NNNTTTCCTGGAAA

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCTCAGAA---
ATTTCCNGGAAATN

MA0137.3_STAT1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCTCAGAA-
TTTCCTGGAAA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCTCAGAA--
CSTGGGAAAD

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTCAGAA--
TTTCCNGGAAAN

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTCAGAA-
TTCTNMGGAA

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTCAGAA--
AGTATTCTCGGTTGC