Information for 14-GACGAGTT (Motif 23)


Reverse Opposite:

p-value:1e-5
log p-value:-1.165e+01
Information Content per bp:1.530
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif182.0
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets270.0 +/- 164.2bp
Average Position of motif in Background252.5 +/- 144.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GACGAGTT-----
TTTTACGACTTTCCAT

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GACGAGTT--
GAATGACGAATAAC

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GACGAGTT------
GAAAACTAGTTAACATC

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GACGAGTT-----
NTNNNAGGAGTCTCNTN

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GACGAGTT---
NNAGGGACAAGGGCNC

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GACGAGTT--
ANATTTTACGAGNNNN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GACGAGTT
TGACGT---

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACGAGTT------
GAAGACCAATTAGCGCT

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GACGAGTT
GGACGTGC-

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GACGAGTT-------
ANNNCTAGTTAACNGNN