Information for 23-MACACACACACA (Motif 25)


Reverse Opposite:

p-value:1e-4
log p-value:-9.318e+00
Information Content per bp:1.546
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif4.14%
Number of Background Sequences with motif1396.0
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets275.8 +/- 138.0bp
Average Position of motif in Background246.9 +/- 148.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0042.1_FOXI1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:MACACACACACA---
---AAACAAACANNC

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:MACACACACACA
---AAATAAACA

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----MACACACACACA
AGCGGCACACACGCAA-

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---MACACACACACA-
CGAAGCACACAAAATA

MA0041.1_Foxd3/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:MACACACACACA---
---AAACAAACATTC

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--MACACACACACA--
AAAGTAAACAAAAATT

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MACACACACACA-----
-AAACAGACAAAGGAAT

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-MACACACACACA--
CAAACCACAAACCCC

MA0472.1_EGR2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:MACACACACACA---
CCCCCGCCCACGCAC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:MACACACACACA
CRCCCACGCA--