Information for 5-GTTGAACGTTCC (Motif 5)


Reverse Opposite:

p-value:1e-26
log p-value:-6.187e+01
Information Content per bp:1.787
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets265.9 +/- 161.9bp
Average Position of motif in Background150.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAACGTTCC------
TTCTAGAANNTTCCAGAANN

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTTGAACGTTCC--
--TGACCTTTNCNT

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTGAACGTTCC-
TTCTAGAABNTTCTA

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAACGTTCC
GTGTTGN-------

MA0486.1_HSF1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTGAACGTTCC
CTTCTAGAAGGTTCT

MA0101.1_REL/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTTGAACGTTCC
--GGGGATTTCC

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTGAACGTTCC
GTTGCGCAAT--

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAACGTTCC--
NNNGTGACCTTTGNNN

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAACGTTCC--
NNNNTGACCTTTNNNN

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTTGAACGTTCC---
-----RCATTCCWGG