Information for 7-GATTVCATTSGA (Motif 7)


Reverse Opposite:

p-value:1e-24
log p-value:-5.542e+01
Information Content per bp:1.528
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets257.9 +/- 132.5bp
Average Position of motif in Background195.6 +/- 102.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GATTVCATTSGA
GGGATTGCATNN--

MA0468.1_DUX4/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATTVCATTSGA
TGATTAAATTA--

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GATTVCATTSGA
TNGAATTTCATTNAN

MA0488.1_JUN/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GATTVCATTSGA
AAGATGATGTCAT----

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATTVCATTSGA
-ATTGCATAA--

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GATTVCATTSGA
NGTAGGTTGGCATNNN-

MA0507.1_POU2F2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GATTVCATTSGA
TTCATTTGCATAT--

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATTVCATTSGA-
GGTTGCCATGGCAA

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GATTVCATTSGA
AAAGATGATGTCATC---

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATTVCATTSGA
-ATTGCATCAK-