Information for 13-GGGCACATGT (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.136e+01
Information Content per bp:1.845
Number of Target Sequences with motif275.0
Percentage of Target Sequences with motif7.66%
Number of Background Sequences with motif2428.1
Percentage of Background Sequences with motif5.23%
Average Position of motif in Targets270.1 +/- 152.8bp
Average Position of motif in Background279.2 +/- 160.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0058.2_MAX/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGCACATGT
AAGCACATGG

MA0147.2_Myc/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GGGCACATGT
AAGCACATGG

MA0464.1_Bhlhe40/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGGCACATGT-
NTGCACGTGAG

MA0526.1_USF2/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGCACATGT-
GGTCACATGAC

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GGGCACATGT----
NNTNCGCACCTGTNGAN

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGGCACATGT-
-GTCACGTGGM

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGCACATGT
-GNCACGTG-

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GGGCACATGT-
NTNTATGTGCACATNNN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGCACATGT-----
AAGGCCAGATGGTCCGG

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGCACATGT-----
CNGACACCTGTTCNNN