Information for 6-ACCTAATG (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.898
Number of Target Sequences with motif300.0
Percentage of Target Sequences with motif8.35%
Number of Background Sequences with motif2817.3
Percentage of Background Sequences with motif6.07%
Average Position of motif in Targets272.4 +/- 159.9bp
Average Position of motif in Background273.7 +/- 162.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0132.1_Pdx1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ACCTAATG
--CTAATT

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACCTAATG-
-GKTAATGR

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ACCTAATG--
--CTAATKGV

PH0058.1_Hoxb3/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACCTAATG-------
TGAGCTAATTAGTTGGA

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACCTAATG---
-GTTAATGGCC

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACCTAATG-
-NCTAATTA

PB0135.1_Hoxa3_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACCTAATG------
CCTTAATNGNTTTT

MA0075.1_Prrx2/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACCTAATG
---TAATT

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCTAATG--
--YTAATCCY

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACCTAATG-------
AAACATAATGAGGTTGC