Information for 7-CTASMCTA (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.697
Number of Target Sequences with motif1928.0
Percentage of Target Sequences with motif53.67%
Number of Background Sequences with motif22833.2
Percentage of Background Sequences with motif49.20%
Average Position of motif in Targets276.6 +/- 158.8bp
Average Position of motif in Background278.6 +/- 161.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTASMCTA
BCAGACWA

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTASMCTA---
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTASMCTA---
TNNTGCTACTGTNNNN

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTASMCTA
NNACTTGCCTT

MA0103.2_ZEB1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTASMCTA
CCTCACCTG

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTASMCTA------
NTCNTCCCCTATNNGNN

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CTASMCTA----
CTGATCGAAACCAAAGT

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CTASMCTA
ACAACAC--

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CTASMCTA--
----GCTGTG

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------CTASMCTA-
ATAAACCGAAACCAA