Information for 10-AAGCTCCG (Motif 18)


Reverse Opposite:

p-value:1e-5
log p-value:-1.351e+01
Information Content per bp:1.530
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif630.9
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets269.0 +/- 140.6bp
Average Position of motif in Background279.9 +/- 155.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.84
Offset:2
Orientation:forward strand
Alignment:AAGCTCCG
--GCTCCG

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGCTCCG
CAAGCTT--

MA0131.1_HINFP/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGCTCCG-
TAACGTCCGC

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGCTCCG
-NGCTN--

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGCTCCG--
NRYTTCCGGY

MA0048.1_NHLH1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGCTCCG-
NCGCAGCTGCGN

MA0483.1_Gfi1b/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCTCCG--
AAATCACAGCA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGCTCCG-
AAATCACTGC

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGCTCCG
--GCTTCC

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGCTCCG--
HACTTCCGGY