Information for 12-TTTCACCG (Motif 19)


Reverse Opposite:

p-value:1e-5
log p-value:-1.292e+01
Information Content per bp:1.970
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif799.8
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets283.5 +/- 153.4bp
Average Position of motif in Background293.9 +/- 150.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTCACCG--
ACTTTCACTTTC

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTCACCG--
SCTGTCARCACC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTCACCG
TGGTTTCAGT-

MA0508.1_PRDM1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTTCACCG---
TCACTTTCACTTTCN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTCACCG
--TCCCCA

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTCACCG
KTTCACACCT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTCACCG
TGACACCT

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCACCG----
TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCACCG----
TCNNTTTACAGCGNNNT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTTCACCG
ATTAACACCT