Information for 1-CTTTTTTTTT (Motif 2)


Reverse Opposite:

p-value:1e-28
log p-value:-6.664e+01
Information Content per bp:1.923
Number of Target Sequences with motif1071.0
Percentage of Target Sequences with motif29.82%
Number of Background Sequences with motif10098.0
Percentage of Background Sequences with motif21.76%
Average Position of motif in Targets281.5 +/- 138.6bp
Average Position of motif in Background276.5 +/- 154.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTTTTT----
NNNNTTTTTTTTTNAAC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:CTTTTTTTTT-----
-TTTTTTTTCNNGTN

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTTTTT----
GNATTTTTTTTTTGANC

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTTTTT---
NTNTTGTTGTTTGTN

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTTTTTTTTT-----
NNTTTNTTTTNGNNN

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTTTTT---
NNTTTTTCTTATNT

MA0514.1_Sox3/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTTTTT
CCTTTGTTTT-

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTTTTTTT--
NNNTCCTTTGTTCTNNN

MA0481.1_FOXP1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTTTTTTTT------
-CTTTGTTTACTTTTN

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTTTTT-----
NNTTTTGTTTTGATNT