Information for 14-AGTATAAG (Motif 23)


Reverse Opposite:

p-value:1e-5
log p-value:-1.161e+01
Information Content per bp:1.650
Number of Target Sequences with motif438.0
Percentage of Target Sequences with motif12.19%
Number of Background Sequences with motif4629.7
Percentage of Background Sequences with motif9.98%
Average Position of motif in Targets270.6 +/- 156.1bp
Average Position of motif in Background278.4 +/- 159.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGTATAAG----
TATAATTATAATATTC

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGTATAAG----
NCGTATTATAATCNTA

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGTATAAG----
NNTAATTATAATNANN

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGTATAAG----
GCTAATTATAATTATC

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTATAAG-
-GGATTAGC

MA0124.1_NKX3-1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTATAAG
TAAGTAT---

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTATAAG--
NAGATAAGNN

MA0109.1_Hltf/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTATAAG---
-NNATAAGGNN

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTATAAG-
NNGAGATAAGA

MA0111.1_Spz1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGTATAAG-
AGGGTAACAGC