| p-value: | 1e-3 |
| log p-value: | -9.010e+00 |
| Information Content per bp: | 1.941 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 0.14% |
| Number of Background Sequences with motif | 6.2 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 293.7 +/- 158.1bp |
| Average Position of motif in Background | 317.6 +/- 135.9bp |
| Strand Bias (log2 ratio + to - strand density) | 2.9 |
| Multiplicity (# of sites on avg that occur together) | 5.20 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0161.1_NFIC/Jaspar
| Match Rank: | 1 |
| Score: | 0.63
| | Offset: | 7
| | Orientation: | forward strand |
| Alignment: | GGCTGGCTTGGC-
-------TTGGCA |
|
|
|
PB0029.1_Hic1_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GGCTGGCTTGGC
NGTAGGTTGGCATNNN |
|
|
|
MA0092.1_Hand1::Tcfe2a/Jaspar
| Match Rank: | 3 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GGCTGGCTTGGC
GGTCTGGCAT--- |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 4 |
| Score: | 0.57
| | Offset: | 6
| | Orientation: | reverse strand |
| Alignment: | GGCTGGCTTGGC--
------CTTGGCAA |
|
|
|
POL006.1_BREu/Jaspar
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGCTGGCTTGGC
GGCGCGCT---- |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 6 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GGCTGGCTTGGC--
NGTTGCCATGGCAA |
|
|
|
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 7 |
| Score: | 0.54
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GGCTGGCTTGGC---
GTCATGCHTGRCTGS |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.54
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GGCTGGCTTGGC
NNTNNTGTCTGGNNTNG- |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 9 |
| Score: | 0.53
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GGCTGGCTTGGC--
GGTTGCCATGGCAA |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 10 |
| Score: | 0.53
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GGCTGGCTTGGC
TWGTCTGV------ |
|
|
|
