Information for 23-CAGCAGATCCAC (Motif 29)


Reverse Opposite:

p-value:1e-1
log p-value:-4.527e+00
Information Content per bp:1.978
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets276.3 +/- 147.2bp
Average Position of motif in Background325.6 +/- 103.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CAGCAGATCCAC
------ATCCAC

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGCAGATCCAC
CAGCTGNT----

MA0496.1_MAFK/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CAGCAGATCCAC
CTGAGTCAGCAATTT---

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAGCAGATCCAC---
---SSAATCCACANN

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGCAGATCCAC
HCAGCTGDTN---

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGATCCAC
AGCAGCTGCTNN--

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGATCCAC
HWWGTCAGCAWWTTT--

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGCAGATCCAC
NCAGCTGCTG---

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CAGCAGATCCAC
NCTANGTCAGCAAATTT--

MA0495.1_MAFF/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CAGCAGATCCAC
GCTGAGTCAGCAATTTTT-