Information for 9-CATTCGATGATG (Motif 3)


Reverse Opposite:

p-value:1e-19
log p-value:-4.475e+01
Information Content per bp:1.875
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets295.6 +/- 180.8bp
Average Position of motif in Background287.8 +/- 152.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0488.1_JUN/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CATTCGATGATG----
---AAGATGATGTCAT

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CATTCGATGATG
-----CATGAC-

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CATTCGATGATG----
------ATGATGCAAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CATTCGATGATG----
------MTGATGCAAT

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATTCGATGATG---
NNCTNAATTATGANN

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CATTCGATGATG-----
--AAAGATGATGTCATC

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CATTCGATGATG--
TAATTCAATGAAGTG

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CATTCGATGATG-
-----GCTGACGC

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CATTCGATGATG
YTAATYNRATTA--

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CATTCGATGATG
TAATCHGATTAC-