Information for 24-TATCTATCCATA (Motif 30)


Reverse Opposite:

p-value:1e-1
log p-value:-4.032e+00
Information Content per bp:1.778
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets205.0 +/- 70.2bp
Average Position of motif in Background197.2 +/- 162.7bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)3.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TATCTATCCATA-----
AAAATATGCATAATAAA

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TATCTATCCATA-
CTTATCTCHMCATCT

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TATCTATCCATA---
-----ATGMATATDC

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TATCTATCCATA
NTATYGATCH---

MA0033.1_FOXL1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TATCTATCCATA
----TATACATA

MA0070.1_PBX1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TATCTATCCATA
CCATCAATCAAA-

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TATCTATCCATA
YSTTATCT-------

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-10
Orientation:reverse strand
Alignment:----------TATCTATCCATA
NNTNANTTCTTATCTCTANANN

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TATCTATCCATA
NNNGTAACTANGNNA-

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TATCTATCCATA-
ATGGGATATATCCGCCT