Information for 12-MGTGTGTGTGTG (Motif 4)


Reverse Opposite:

p-value:1e-14
log p-value:-3.341e+01
Information Content per bp:1.756
Number of Target Sequences with motif236.0
Percentage of Target Sequences with motif6.57%
Number of Background Sequences with motif1773.2
Percentage of Background Sequences with motif3.82%
Average Position of motif in Targets272.1 +/- 132.4bp
Average Position of motif in Background268.8 +/- 180.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:MGTGTGTGTGTG-----
-NNGCGTGTGTGCNGCN

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:MGTGTGTGTGTG----
-GTGCGTGGGCGGGNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:MGTGTGTGTGTG
--TGCGTGGGYG

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:MGTGTGTGTGTG--
----TGGGTGTGGC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:MGTGTGTGTGTG---
---NTGGGTGTGGCC

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:MGTGTGTGTGTG
NGCGTGGGCGGR

MA0493.1_Klf1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:MGTGTGTGTGTG---
----TGGGTGTGGCN

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:MGTGTGTGTGTG-----
-NNNNTTGTGTGCTTNN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:MGTGTGTGTGTG
----TGCGTG--

MA0511.1_RUNX2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:MGTGTGTGTGTG-----
--GGGGTTTGTGGTTTG